C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9833
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061419 Gm9833-201 ENSMUSG00000049230 10090 + 3:10088173-10092564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061419
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061419 0.122±0.02 0.195±0.00 0.056±0.04 2.588±1.02 0.190±0.11 0.133±0.05 0.099±0.09 0.074±0.01 0.342±0.51 0.094±0.04 0.032±0.01 0.411±0.24 0.027±0.02 0.932±0.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000166 IEA nucleotide binding
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267836 MYEF2-003 protein_coding Homo_sapiens 0 1539
ENST00000324324 MYEF2-001 protein_coding Homo_sapiens 0 1539
ENST00000557868 MYEF2-014 processed_transcript Homo_sapiens 0 403
ENST00000558289 MYEF2-005 retained_intron Homo_sapiens 0 313
ENST00000558395 MYEF2-009 protein_coding Homo_sapiens 0 636
ENST00000559057 MYEF2-013 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000559862 MYEF2-007 processed_transcript Homo_sapiens 0 237
ENST00000560157 MYEF2-008 processed_transcript Homo_sapiens 4e-34 148
ENST00000560172 MYEF2-012 protein_coding Homo_sapiens 0 279
ENST00000560513 MYEF2-011 retained_intron Homo_sapiens 0 327
ENST00000560530 MYEF2-004 retained_intron Homo_sapiens 0 313
ENST00000561151 MYEF2-006 nonsense_mediated_decay Homo_sapiens 6e-34 148
ENST00000561301 MYEF2-010 retained_intron Homo_sapiens 0 634
ENST00000561351 MYEF2-002 nonsense_mediated_decay Homo_sapiens 0 933
ENST00000610570 MYEF2-201 protein_coding Homo_sapiens 0 920
ENST00000616409 MYEF2-202 protein_coding Homo_sapiens 0 1480
ENST00000620867 MYEF2-203 protein_coding Homo_sapiens 0 313

Loading