C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myelin expression factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267836 MYEF2-003 ENSG00000104177 9606 - 15:48141797-48178353 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisENST00000267836
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000267836 1.259±0.00 0.908±0.00 3.134±0.90 0.581±0.05 1.256±0.00 0.997±0.00 2.242±0.00 0.374±0.20 0.291±0.07 7.153±3.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NB CIL_0004NB_0001 CGP 15:47184101-48142672
CIL_0004QO CIL_0004QO_0002 CGP 15:48120972-48178517
CIL_0004NI CIL_0004NI_0001 CGP 15:48134631-48203756

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142718 Myef2-005 protein_coding Mus_musculus 0 2409
ENSMUST00000152367 Myef2-001 protein_coding Mus_musculus 0 1760
ENSMUST00000061419 Gm9833-201 protein_coding Mus_musculus 0 1539
ENSMUST00000137091 Myef2-004 protein_coding Mus_musculus 0 1496
ENSMUST00000067780 Myef2-201 protein_coding Mus_musculus 0 1426
ENSMUST00000147105 Myef2-003 protein_coding Mus_musculus 0 1426
ENSMUST00000110501 Myef2-008 nonsense_mediated_decay Mus_musculus 0 1380
ENSMUST00000149911 Myef2-009 retained_intron Mus_musculus 0 1356
ENSMUST00000089825 Myef2-002 protein_coding Mus_musculus 0 1280
ENSMUST00000129945 Myef2-007 processed_transcript Mus_musculus 0 610
ENSMUST00000070353 Slc24a5-001 protein_coding Mus_musculus 0 425
ENSDART00000082506 myef2-201 protein_coding Danio_rerio 0 272
ENSDART00000082504 myef2-001 protein_coding Danio_rerio 0 272
ENSDART00000123823 myef2-202 protein_coding Danio_rerio 0 261
ENSDART00000142036 myef2-003 retained_intron Danio_rerio 9e-33 147

Loading