C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large, P2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530398 RPLP2-009 ENSG00000177600 9606 + 11:810269-812871 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungMuscleENST00000530398
Transcript ID Brain Breast Colon Lung Muscle
ENST00000530398 84.980±0.00 198.598±0.00 179.499±0.00 148.796±0.00 120.904±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EP CIL_0003EP_0001 CGP 11:799179-812880
CIL_0003EM CIL_0003EM_0001 CGP 11:809647-825573

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062370 Wdr89-001 protein_coding Mus_musculus 0 359
ENSMUST00000106003 Rplp2-005 protein_coding Mus_musculus 0 353
ENSMUST00000106004 Rplp2-004 protein_coding Mus_musculus 0 353
ENSMUST00000084434 Rplp2-001 protein_coding Mus_musculus 0 353
ENSMUST00000191005 Rplp2-ps1-002 unprocessed_pseudogene Mus_musculus 0 342
ENSMUST00000134636 Rplp2-006 processed_transcript Mus_musculus 0 298
ENSMUST00000117283 Gm15198-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000117848 Gm8805-001 processed_pseudogene Mus_musculus 6e-40 167

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