C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064016 Gpr17-001 ENSMUSG00000052229 10090 - 18:31942997-31949636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMusclePlacentaENSMUST00000064016
Transcript ID Brain Breast Liver Muscle Placenta
ENSMUST00000064016 1.847±0.76 0.653±0.00 0.011±0.00 0.548±0.04 0.426±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000197 CIL_000197_0002 CGP 18:31931507-31958619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272644 GPR17-001 protein_coding Homo_sapiens 0 1027
ENST00000324938 LIMS2-005 protein_coding Homo_sapiens 1e-35 156
ENST00000355119 LIMS2-001 protein_coding Homo_sapiens 1e-35 156
ENST00000393018 GPR17-003 protein_coding Homo_sapiens 0 1024
ENST00000409455 LIMS2-004 protein_coding Homo_sapiens 1e-35 156
ENST00000409808 LIMS2-002 protein_coding Homo_sapiens 1e-35 156
ENST00000410011 LIMS2-003 protein_coding Homo_sapiens 1e-35 156
ENST00000466410 LIMS2-011 retained_intron Homo_sapiens 1e-35 156
ENST00000469300 LIMS2-014 retained_intron Homo_sapiens 2e-35 156
ENST00000476932 LIMS2-017 retained_intron Homo_sapiens 7e-38 163
ENST00000486700 GPR17-002 processed_transcript Homo_sapiens 0 1027
ENST00000496086 GPR17-004 processed_transcript Homo_sapiens 0 763
ENST00000544369 GPR17-201 protein_coding Homo_sapiens 0 1027
ENST00000545738 LIMS2-018 protein_coding Homo_sapiens 8e-36 156

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