C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM and senescent cell antigen-like domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469300 LIMS2-014 ENSG00000072163 9606 - 2:127638425-127656085 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000469300
Transcript ID Liver Ovary
ENST00000469300 1.211±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000197 CIL_000197_0001 CGP 2:127638381-127681786

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025254 Lims2-201 protein_coding Mus_musculus 0 427
ENSDART00000033980 lims1-201 protein_coding Danio_rerio 0 211
ENSMUST00000105468 Lims1-003 protein_coding Mus_musculus 1e-38 167
ENSMUST00000020078 Lims1-001 protein_coding Mus_musculus 1e-38 167
ENSMUST00000064016 Gpr17-001 protein_coding Mus_musculus 2e-35 156
ENSMUST00000020077 Lims1-002 protein_coding Mus_musculus 4e-18 99
ENSMUST00000148799 Lims1-005 processed_transcript Mus_musculus 1e-17 97
ENSMUST00000119116 Gm15665-001 processed_pseudogene Mus_musculus 7e-16 92

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