C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 53, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065162 Fam53a-006 ENSMUSG00000037339 10090 - 5:33600356-33628912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065162 1.837±0.71 2.134±0.21 1.814±0.11 0.817±0.21 2.760±0.25 1.838±0.20 1.127±0.12 0.862±0.15 0.843±0.36 2.541±0.11 1.276±0.14 5.240±1.27 0.497±0.16 0.738±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006LY CIL_0006LY_0002 CGP 5:33430734-33629635
CIL_0006LX CIL_0006LX_0002 CGP 5:33600351-33652574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISO nucleus
GO:0006606 ISO protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308132 FAM53A-201 protein_coding Homo_sapiens 1e-36 159
ENST00000461064 FAM53A-002 protein_coding Homo_sapiens 8e-27 126
ENST00000489363 FAM53A-001 protein_coding Homo_sapiens 1e-36 159

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