C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: La ribonucleoprotein domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065411 Larp1b-202 ENSMUSG00000025762 10090 + 3:41021939-41040234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065411 0.217±0.08 0.195±0.11 0.452±0.09 0.125±0.00 0.126±0.03 0.297±0.14 0.132±0.02 0.155±0.02 0.168±0.08 0.074±0.02 0.084±0.00 0.153±0.05 0.040±0.03 0.475±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0002 VISTA 3:40857758-41459600
CIL_0006YL CIL_0006YL_0003 CGP 3:41021939-41083046

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326639 LARP1B-001 protein_coding Homo_sapiens 0 394
ENST00000503725 LARP1B-008 processed_transcript Homo_sapiens 0 394
ENST00000506199 LARP1B-010 processed_transcript Homo_sapiens 0 318
ENST00000507259 LARP1B-007 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000508648 LARP1B-009 processed_transcript Homo_sapiens 8.96831e-44 182

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