C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: musashi RNA-binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067168 Msi1-004 ENSMUSG00000054256 10090 + 5:115429997-115454080 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067168 2.505±2.26 5.588±1.10 0.429±0.05 36.270±3.05 1.261±0.54 1.513±0.35 0.117±0.01 0.511±0.15 0.336±0.14 0.204±0.06 0.070±0.03 10.425±2.50 0.742±0.28 16.177±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257552 MSI1-001 protein_coding Homo_sapiens 0 1107
ENST00000276123 ZNF711-002 protein_coding Homo_sapiens 0.00002 55
ENST00000306422 OTP-001 protein_coding Homo_sapiens 0.00002 57
ENST00000373165 ZNF711-001 protein_coding Homo_sapiens 0.00002 55
ENST00000546622 MSI1-003 processed_transcript Homo_sapiens 0 411
ENST00000546985 MSI1-002 protein_coding Homo_sapiens 0 721

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