C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysocardiolipin acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067545 Lclat1-001 ENSMUSG00000054469 10090 + 17:73107994-73243368 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067545 1.536±0.91 3.022±0.64 0.981±0.22 0.508±0.00 1.711±0.53 4.586±0.65 4.027±1.04 3.553±2.09 2.779±2.60 5.307±1.87 1.122±0.51 3.492±1.33 4.212±1.61 1.617±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099K CIL_00099K_0002 VISTA 17:72722163-73324151
CIL_0000VG CIL_0000VG_0002 CGP 17:72918305-73243368
CIL_0000VF CIL_0000VF_0002 CGP 17:73107985-73399296

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003841 IEA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005783 IDA endoplasmic reticulum
GO:0007275 IEA multicellular organismal development
GO:0008152 IEA:IDA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IDA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309052 LCLAT1-001 protein_coding Homo_sapiens 0 1291
ENST00000379509 LCLAT1-006 protein_coding Homo_sapiens 0 1297
ENST00000478015 LCLAT1-008 nonsense_mediated_decay Homo_sapiens 0 1267
ENST00000491680 LCLAT1-007 processed_transcript Homo_sapiens 0 928

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