C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysocardiolipin acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379509 LCLAT1-006 ENSG00000172954 9606 + 2:30447236-30644224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000379509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000379509 0.508±0.00 1.729±0.00 1.762±0.00 0.740±0.46 1.173±0.78 2.273±0.98 3.576±0.61 2.700±0.66 0.805±0.05 1.400±0.10 1.868±0.98 0.557±0.18 5.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099K CIL_00099K_0001 VISTA 2:30059340-30663789
CIL_0000VG CIL_0000VG_0001 CGP 2:30231531-30644225
CIL_0000VF CIL_0000VF_0001 CGP 2:30447226-30820542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003841 IEA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0007275 IEA multicellular organismal development
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0019432 TAS triglyceride biosynthetic process
GO:0035965 TAS cardiolipin acyl-chain remodeling
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067545 Lclat1-001 protein_coding Mus_musculus 0 1297
ENSMUST00000134149 Lclat1-005 processed_transcript Mus_musculus 0 604

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