C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phenylalanyl-tRNA synthetase, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068333 Farsb-001 ENSMUSG00000026245 10090 - 1:78425068-78488897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000068333
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000068333 12.934±1.13 1.362±0.13 20.906±0.83 24.759±5.34 6.624±2.96 10.727±2.12 5.666±1.04 21.240±15.41 15.850±1.70 9.069±4.07 27.351±7.52 9.765±2.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LF CIL_0008LF_0002 VISTA 1:77884098-78485294
CIL_000464 CIL_000464_0002 CGP 1:78101267-78420289
CIL_00041I CIL_00041I_0003 CGP 1:78310345-78488897

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003723 IEA RNA binding
GO:0004826 IEA phenylalanine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006432 IEA phenylalanyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281828 FARSB-001 protein_coding Homo_sapiens 0 2061
ENST00000435808 FARSBP1-001 processed_pseudogene Homo_sapiens 0 1077

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