C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079608-ENSDARG00000016864 CGP 7955 15:40761733-40811082
GeneTranscriptPositionBiotype
ENSDARG00000016864 (farsb)
phenylalanyl-tRNA synthetase, beta subunit 		ENSDART00000015979 (farsb-001) 40792143-40811082 protein_coding
ENSDART00000144645 (farsb-002) 40804925-40811067 processed_transcript
ENSDARG00000079608 (SGPP2)
sphingosine-1-phosphate phosphatase 2 		ENSDART00000114801 (SGPP2-201) 40761733-40787500 protein_coding
CIL_00041I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163082-ENSG00000116120 CGP 9606 2:222424517-222656337
GeneTranscriptPositionBiotype
ENSG00000116120 (FARSB)
phenylalanyl-tRNA synthetase, beta subunit 		ENST00000281828 (FARSB-001) 222570536-222656337 protein_coding
ENSG00000163082 (SGPP2)
sphingosine-1-phosphate phosphatase 2 		ENST00000321276 (SGPP2-001) 222424517-222560948 protein_coding
ENSG00000202016 (RNU6-619P)
RNA, U6 small nuclear 619, pseudogene 		ENST00000365146 (RNU6-619P-201) 222498291-222498398 snRNA
ENSG00000228670 (NANOGP2)
Nanog homeobox pseudogene 2 		ENST00000435391 (NANOGP2-001) 222452400-222453126 processed_pseudogene
ENSG00000234285 (GAPDHP49)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 49 		ENST00000421421 (GAPDHP49-001) 222503883-222504843 processed_pseudogene
ENSG00000261428 (RP11-16P6.1)
 ENST00000568928 (RP11-16P6.1-001) 222566899-222569719 antisense
CIL_00041I_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032908-ENSMUSG00000026245 CGP 10090 1:78310345-78488897
GeneTranscriptPositionBiotype
ENSMUSG00000026245 (Farsb)
phenylalanyl-tRNA synthetase, beta subunit 		ENSMUST00000068333 (Farsb-001) 78425068-78488897 protein_coding
ENSMUST00000170217 (Farsb-002) 78417975-78488859 protein_coding
ENSMUST00000188247 (Farsb-006) 78462996-78488859 protein_coding
ENSMUST00000189529 (Farsb-004) 78425085-78488862 nonsense_mediated_decay
ENSMUST00000189931 (Farsb-007) 78471186-78488795 processed_transcript
ENSMUST00000190441 (Farsb-003) 78472570-78488842 protein_coding
ENSMUST00000191021 (Farsb-005) 78477871-78488837 retained_intron
ENSMUSG00000032908 (Sgpp2)
sphingosine-1-phosphate phosphotase 2 		ENSMUST00000036172 (Sgpp2-001) 78310345-78420289 protein_coding
ENSMUSG00000099561 (RP24-404O8.1)
predicted gene 28410 		ENSMUST00000188113 (RP24-404O8.1-001) 78325628-78340106 antisense
ENSMUSG00000101798 (RP24-538F21.4)
predicted gene 28995 		ENSMUST00000186625 (RP24-538F21.4-001) 78433352-78433612 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041I_0001ENSDARG00000016864ENSDART00000015979ENSDART00000144645ENSDARG00000079608ENSDART00000114801CIL_00041I_0002ENSG00000116120ENST00000281828ENSG00000163082ENST00000321276ENSG00000202016ENST00000365146ENSG00000228670ENST00000435391ENSG00000234285ENST00000421421ENSG00000261428ENST00000568928CIL_00041I_0003ENSMUSG00000026245ENSMUST00000068333ENSMUST00000170217ENSMUST00000188247ENSMUST00000189529ENSMUST00000189931ENSMUST00000190441ENSMUST00000191021ENSMUSG00000032908ENSMUST00000036172ENSMUSG00000099561ENSMUST00000188113ENSMUSG00000101798ENSMUST00000186625
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041I_0001ENSDARG00000016864ENSDART00000015979ENSDARG00000079608ENSDART00000114801CIL_00041I_0002ENSG00000116120ENST00000281828ENSG00000163082ENST00000321276ENSG00000202016ENST00000365146ENSG00000228670ENST00000435391ENSG00000234285ENST00000421421ENSG00000261428ENST00000568928CIL_00041I_0003ENSMUSG00000026245ENSMUST00000068333ENSMUST00000170217ENSMUST00000188247ENSMUST00000189529ENSMUSG00000032908ENSMUST00000036172ENSMUSG00000099561ENSMUST00000188113ENSMUSG00000101798ENSMUST00000186625
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016864 ENSDART00000015979 N/A N/A N/A 19.814±5.10 N/A N/A 14.058±6.90 8.516±4.32 6.634±0.00 N/A 12.849±0.00 N/A N/A N/A
ENSDART00000144645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079608 ENSDART00000114801 N/A N/A N/A 0.186±0.08 N/A N/A 0.124±0.07 N/A 0.062±0.00 N/A 0.094±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116120 ENST00000281828 7.159±0.00 8.098±0.00 0.922±0.00 9.446±2.72 7.708±0.00 6.576±0.00 3.900±2.27 5.942±0.00 3.461±1.80 2.691±0.00 8.154±5.33 5.283±1.75 5.328±2.93 10.034±4.07
ENSG00000163082 ENST00000321276 0.110±0.00 0.348±0.00 1.774±0.00 5.712±0.00 0.670±0.08 0.610±0.00 3.032±2.36 7.633±7.59 0.303±0.25 3.319±1.92 0.163±0.00 4.065±3.85 0.110±0.03 1.214±0.36
ENSG00000202016 ENST00000365146 N/A N/A N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A 0.446±0.00 N/A N/A
ENSG00000228670 ENST00000435391 N/A N/A 0.139±0.00 0.317±0.00 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A
ENSG00000234285 ENST00000421421 N/A N/A 0.629±0.00 N/A N/A 0.679±0.00 0.089±0.00 N/A N/A 0.893±0.00 N/A 0.131±0.00 N/A N/A
ENSG00000261428 ENST00000568928 0.238±0.00 0.879±0.00 0.068±0.00 0.688±0.23 0.306±0.14 0.177±0.02 0.261±0.11 0.227±0.17 0.208±0.14 0.086±0.05 0.965±0.54 0.646±0.48 0.082±0.01 0.463±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026245 ENSMUST00000068333 12.934±1.13 1.362±0.13 20.906±0.83 24.759±5.34 6.624±2.96 N/A 10.727±2.12 5.666±1.04 21.240±15.41 N/A 15.850±1.70 9.069±4.07 27.351±7.52 9.765±2.34
ENSMUST00000170217 3.951±1.57 1.708±0.40 N/A 3.154±0.00 2.614±0.86 15.457±0.79 2.193±0.00 6.947±0.88 N/A 9.773±0.70 N/A 6.466±2.20 6.963±2.95 4.794±1.83
ENSMUST00000188247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.309±0.85 N/A N/A N/A
ENSMUST00000189529 2.302±0.00 3.854±0.70 N/A 4.627±0.60 3.937±1.45 N/A 1.951±0.00 5.039±1.35 5.033±2.95 N/A 3.175±0.00 4.749±1.01 8.375±0.00 2.421±0.00
ENSMUST00000189931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032908 ENSMUST00000036172 2.508±0.12 0.934±0.30 N/A 3.153±0.00 N/A 44.296±10.11 N/A 7.980±1.02 N/A 17.494±0.22 N/A 4.512±1.41 6.310±2.83 4.682±0.64
ENSMUSG00000099561 ENSMUST00000188113 0.026±0.00 0.144±0.07 0.006±0.00 0.037±0.02 N/A 0.206±0.07 N/A 0.081±0.02 0.006±0.00 0.063±0.02 N/A 0.627±0.26 0.045±0.00 0.144±0.11
ENSMUSG00000101798 ENSMUST00000186625 N/A N/A 0.209±0.00 0.208±0.00 N/A N/A N/A N/A N/A 0.745±0.23 0.261±0.00 1.333±0.00 0.635±0.43 0.601±0.16

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