C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA D430042O09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069660 D430042O09Rik-001 ENSMUSG00000032743 10090 + 7:125707915-125874793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069660 2.882±1.59 1.221±0.00 2.201±0.31 2.922±1.88 2.471±0.82 3.392±1.17 1.085±0.60 2.633±1.17 1.323±0.53 2.518±1.32 1.030±0.30 6.019±1.67 3.084±1.48 9.959±2.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FH CIL_0008FH_0002 VISTA 7:125464047-126065353
CIL_000435 CIL_000435_0002 CGP 7:125640955-125874793
CIL_0005TR CIL_0005TR_0002 CGP 7:125707915-126082411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261588 KIAA0556-001 protein_coding Homo_sapiens 0 3306
ENST00000564749 KIAA0556-003 retained_intron Homo_sapiens 0 390
ENST00000565672 KIAA0556-005 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000566023 KIAA0556-002 retained_intron Homo_sapiens 3e-20 102
ENST00000568258 KIAA0556-009 protein_coding Homo_sapiens 0 558
ENST00000573850 KIAA0556-010 retained_intron Homo_sapiens 0 684
ENST00000618117 KIAA0556-011 protein_coding Homo_sapiens 0 350

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