C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G-protein-coupled receptor 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070449 Gpr50-001 ENSMUSG00000056380 10090 + X:71663667-71669257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070449
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070449 0.012±0.00 0.018±0.00 0.011±0.01 0.687±0.46 0.010±0.00 0.012±0.01 0.029±0.03 0.020±0.01 0.017±0.00 0.050±0.02 8.374±5.95 0.123±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0002 VISTA X:71400355-72001555
CIL_0001AV CIL_0001AV_0002 CGP X:71555918-71669257
CIL_0001AU CIL_0001AU_0002 CGP X:71663667-71839757

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0008502 IEA melatonin receptor activity
GO:0016021 IEA integral component of membrane
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218316 GPR50-001 protein_coding Homo_sapiens 0 1386
ENST00000617907 GPR50-201 protein_coding Homo_sapiens 0 1363

Loading