C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617907 GPR50-201 ENSG00000102195 9606 + X:151176722-151181437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyPlacentaTestisENST00000617907
Transcript ID Adipose Breast Kidney Placenta Testis
ENST00000617907 0.076±0.00 0.049±0.00 0.023±0.00 0.095±0.05 0.036±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0001 VISTA X:150939220-151540580
CIL_0001AV CIL_0001AV_0001 CGP X:150980509-151181465
CIL_0001AU CIL_0001AU_0001 CGP X:151176653-151409364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070449 Gpr50-001 protein_coding Mus_musculus 0 1363
ENSMUST00000144712 Gpr50-002 processed_transcript Mus_musculus 0 643
ENSMUST00000131554 Gpr50-003 processed_transcript Mus_musculus 0 353

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