C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001AU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102195-ENSG00000160131 CGP 9606 X:151176653-151409364
GeneTranscriptPositionBiotype
ENSG00000160131 (VMA21)
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
ENST00000330374 (VMA21-001) 151397204-151409364 protein_coding
ENST00000370361 (VMA21-003) 151396566-151405157 protein_coding
ENST00000477649 (VMA21-002) 151396515-151405157 processed_transcript
ENSG00000228717 (AF013593.1)
ENST00000458074 (AF013593.1-001) 151226229-151227715 processed_pseudogene
ENSG00000234696 (GPR50-AS1)
GPR50 antisense RNA 1
ENST00000454196 (GPR50-AS1-001) 151175192-151177836 antisense
ENSG00000269993 (AF003625.3)
ENST00000602313 (AF003625.3-001) 151182386-151182855 lincRNA
ENSG00000278724 (Metazoa_SRP)
Metazoan signal recognition particle RNA
ENST00000615501 (Metazoa_SRP.1-488) 151275509-151275789 misc_RNA
CIL_0001AU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056380-ENSMUSG00000073131 CGP 10090 X:71663667-71839757
GeneTranscriptPositionBiotype
ENSMUSG00000056380 (Gpr50)
G-protein-coupled receptor 50
ENSMUST00000070449 (Gpr50-001) 71663667-71669257 protein_coding
ENSMUST00000131554 (Gpr50-003) 71663966-71667392 processed_transcript
ENSMUST00000144712 (Gpr50-002) 71663966-71667392 processed_transcript
ENSMUSG00000073131 (Vma21)
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
ENSMUST00000114575 (Vma21-003) 71816790-71824706 protein_coding
ENSMUST00000114576 (Vma21-001) 71816758-71824706 protein_coding
ENSMUST00000114577 (Vma21-002) 71815924-71824706 protein_coding
ENSMUST00000138979 (Vma21-004) 71816813-71820984 processed_transcript
ENSMUST00000154054 (Vma21-005) 71816790-71839757 processed_transcript
ENSMUSG00000083411 (Rpl30-ps10)
ribosomal protein L30, pseudogene 10
ENSMUST00000117119 (Rpl30-ps10-001) 71803688-71804034 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AU_0001ENSG00000160131ENST00000330374ENST00000370361ENST00000477649ENSG00000228717ENST00000458074ENSG00000234696ENST00000454196ENSG00000269993ENST00000602313ENSG00000278724ENST00000615501CIL_0001AU_0002ENSMUSG00000056380ENSMUST00000070449ENSMUST00000131554ENSMUST00000144712ENSMUSG00000073131ENSMUST00000114575ENSMUST00000114576ENSMUST00000114577ENSMUST00000138979ENSMUST00000154054ENSMUSG00000083411ENSMUST00000117119
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AU_0001ENSG00000160131ENST00000330374ENST00000370361ENST00000477649ENSG00000228717ENST00000458074ENSG00000234696ENST00000454196ENSG00000269993ENST00000602313ENSG00000278724ENST00000615501CIL_0001AU_0002ENSMUSG00000056380ENSMUST00000070449ENSMUST00000131554ENSMUST00000144712ENSMUSG00000073131ENSMUST00000114575ENSMUST00000114576ENSMUST00000114577ENSMUST00000154054ENSMUSG00000083411ENSMUST00000117119
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160131 ENST00000330374 7.184±0.00 5.961±0.00 N/A 7.325±1.05 5.530±1.05 3.653±0.00 2.489±0.56 4.004±2.63 3.820±1.74 4.045±0.06 2.141±0.00 5.005±1.15 3.675±0.22 5.418±2.83
ENST00000370361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.694±0.00 N/A N/A N/A
ENST00000477649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.741±0.00 N/A N/A N/A
ENSG00000228717 ENST00000458074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A
ENSG00000234696 ENST00000454196 N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.095±0.04
ENSG00000269993 ENST00000602313 0.629±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.268±0.00
ENSG00000278724 ENST00000615501 0.115±0.00 0.294±0.00 N/A 0.587±0.00 0.061±0.00 0.167±0.00 0.349±0.00 0.729±0.00 0.268±0.00 0.461±0.00 0.109±0.00 1.255±0.00 N/A 0.273±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056380 ENSMUST00000070449 0.012±0.00 0.018±0.00 0.011±0.01 0.687±0.46 0.010±0.00 N/A N/A 0.012±0.01 0.029±0.03 0.020±0.01 0.017±0.00 0.050±0.02 8.374±5.95 0.123±0.09
ENSMUST00000131554 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144712 N/A N/A 0.020±0.00 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A 0.232±0.19 N/A 0.470±0.10
ENSMUSG00000073131 ENSMUST00000114575 N/A 1.307±0.00 N/A N/A 0.431±0.00 0.330±0.10 N/A N/A N/A N/A N/A 0.544±0.11 N/A 0.121±0.00
ENSMUST00000114576 3.629±0.67 11.086±1.20 5.574±0.77 6.427±3.04 2.580±1.00 2.057±0.60 1.415±0.29 4.513±0.66 4.106±0.71 3.339±0.19 1.099±0.37 2.843±1.69 3.752±2.59 0.678±0.32
ENSMUST00000114577 0.552±0.11 N/A N/A N/A 0.796±0.56 0.396±0.17 0.736±0.09 0.438±0.00 N/A 0.897±0.04 3.014±0.89 0.728±0.22 1.905±1.01 N/A
ENSMUST00000138979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.893±0.00 N/A N/A
ENSMUSG00000083411 ENSMUST00000117119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A

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