C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071301 Rnf7-002 ENSMUSG00000051234 10090 - 9:96471763-96478610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000071301
Transcript ID Liver
ENSMUST00000071301 85.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0002 VISTA 9:96080125-96682941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006919 IDA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008270 IEA zinc ion binding
GO:0008631 IDA intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0008637 IDA apoptotic mitochondrial changes
GO:0043066 IDA negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273480 RNF7-001 protein_coding Homo_sapiens 0 438
ENST00000393000 RNF7-002 protein_coding Homo_sapiens 0 470
ENST00000477012 RNF7-003 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000477393 RNF7-004 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000478598 RNF7P1-001 processed_pseudogene Homo_sapiens 0 383
ENST00000480908 RNF7-007 protein_coding Homo_sapiens 0 248
ENST00000498828 RNF7-006 retained_intron Homo_sapiens 0 248

Loading