C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small nuclear RNA activating complex, polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071544 Snapc3-003 ENSMUSG00000028483 10090 + 4:83417731-83442086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonENSMUST00000071544
Transcript ID Adrenal Breast Colon
ENSMUST00000071544 25.659±4.15 23.135±0.00 11.428±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000147 CIL_000147_0002 CGP 4:83220300-83467676
CIL_0005UX CIL_0005UX_0003 CGP 4:83417724-83486459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380799 SNAPC3-005 protein_coding Homo_sapiens 0 255
ENST00000380821 SNAPC3-002 protein_coding Homo_sapiens 0 640
ENST00000467062 SNAPC3-001 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000490969 SNAPC3-003 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000610884 SNAPC3-201 protein_coding Homo_sapiens 0 640

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