C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5828
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071842 Gm5828-001 ENSMUSG00000091020 10090 - 1:16768279-16770138 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000071842
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000071842 0.016±0.00 0.090±0.00 0.092±0.10 0.045±0.03 0.027±0.01 0.028±0.01 0.018±0.01 0.020±0.00 0.799±0.63 1.172±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OK CIL_0002OK_0002 CGP 1:16688051-17097889

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000416256 TOX4-011 protein_coding Homo_sapiens 0 826
ENST00000447695 TOX4-004 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000448790 TOX4-201 protein_coding Homo_sapiens 0 2163
ENST00000455138 TOX4-007 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000455393 TOX4-003 nonsense_mediated_decay Homo_sapiens 0 1670
ENST00000457430 TOX4-005 protein_coding Homo_sapiens 0 732
ENST00000473176 TOX4-009 retained_intron Homo_sapiens 0 782
ENST00000487242 TOX4-008 retained_intron Homo_sapiens 0 486
ENST00000494242 TOX4-006 processed_transcript Homo_sapiens 0 496
ENST00000514955 TOX4P1-001 processed_pseudogene Homo_sapiens 0 1881
ENST00000613005 TOX4-002 retained_intron Homo_sapiens 0 1609
ENST00000613569 TOX4-001 protein_coding Homo_sapiens 0 2163

Loading