C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TOX high mobility group box family member 4 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514955 TOX4P1-001 ENSG00000248697 9606 + 4:112455924-112457785 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonKidneyLungMuscleENST00000514955
Transcript ID Adipose Adrenal Bladder Colon Kidney Lung Muscle
ENST00000514955 0.016±0.00 0.025±0.00 0.088±0.00 0.008±0.00 0.008±0.00 0.029±0.02 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022766 Tox4-001 protein_coding Mus_musculus 0 2076
ENSMUST00000071842 Gm5828-001 processed_pseudogene Mus_musculus 0 1881
ENSMUST00000152493 Tox4-002 retained_intron Mus_musculus 0 1031
ENSMUST00000137753 Tox4-003 retained_intron Mus_musculus 0 784
ENSMUST00000173361 Tox4-005 processed_transcript Mus_musculus 0 302

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