C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072093 Plxnb1-001 ENSMUSG00000053646 10090 + 9:109095436-109119911 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072093 4.959±3.28 35.929±5.41 6.759±1.54 17.351±4.17 2.730±1.04 2.533±0.67 7.028±0.27 6.333±0.82 4.481±2.09 17.547±1.37 0.204±0.08 27.741±3.83 11.401±3.22 1.753±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002116 ISS semaphorin receptor complex
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005887 ISS integral component of plasma membrane
GO:0007162 ISS negative regulation of cell adhesion
GO:0008360 ISS regulation of cell shape
GO:0014068 IMP positive regulation of phosphatidylinositol 3-kinase signaling
GO:0017154 ISS semaphorin receptor activity
GO:0032321 IMP positive regulation of Rho GTPase activity
GO:0032794 IPI GTPase activating protein binding
GO:0033689 IMP negative regulation of osteoblast proliferation
GO:0043931 IMP ossification involved in bone maturation
GO:0048812 IMP neuron projection morphogenesis
GO:0050772 IGI positive regulation of axonogenesis
GO:0051493 ISS regulation of cytoskeleton organization
GO:0071526 ISS semaphorin-plexin signaling pathway
GO:1900220 IMP semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296440 PLXNB1-001 protein_coding Homo_sapiens 0 3803
ENST00000321063 PLXNA4-201 protein_coding Homo_sapiens 2e-30 141
ENST00000358536 PLXNB1-003 protein_coding Homo_sapiens 0 3958
ENST00000359337 PLXNB2-201 protein_coding Homo_sapiens 8.00001e-41 174
ENST00000359827 PLXNA4-001 protein_coding Homo_sapiens 2e-30 141
ENST00000449094 PLXNB1-007 nonsense_mediated_decay Homo_sapiens 0 2073
ENST00000449103 PLXNB2-001 protein_coding Homo_sapiens 8.99998e-41 174
ENST00000456774 PLXNB1-005 protein_coding Homo_sapiens 0 3083
ENST00000461261 PLXNB1-014 retained_intron Homo_sapiens 0 573
ENST00000462738 PLXNB1-018 retained_intron Homo_sapiens 0 361
ENST00000463165 PLXNB2-005 retained_intron Homo_sapiens 4.00001e-41 174
ENST00000466353 PLXNB1-019 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000470525 PLXNB1-013 retained_intron Homo_sapiens 0 342
ENST00000473996 PLXNB1-006 retained_intron Homo_sapiens 0 202
ENST00000478171 PLXNB1-011 retained_intron Homo_sapiens 0 564
ENST00000479701 PLXNB2-004 retained_intron Homo_sapiens 4.99997e-41 174
ENST00000483676 PLXNB1-012 retained_intron Homo_sapiens 0 473
ENST00000483753 PLXNB1-009 retained_intron Homo_sapiens 0 231
ENST00000484485 PLXNB1-017 processed_transcript Homo_sapiens 0 350
ENST00000485535 PLXNB1-002 retained_intron Homo_sapiens 0 2628
ENST00000496550 PLXNA4-005 retained_intron Homo_sapiens 1e-20 104
ENST00000497627 PLXNB1-010 retained_intron Homo_sapiens 0 291
ENST00000610984 PLXNB2-202 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000614805 PLXNB2-203 protein_coding Homo_sapiens 1.99993e-41 174

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