C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359337 PLXNB2-201 ENSG00000196576 9606 - 22:50274979-50307572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000359337
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000359337 7.912±0.00 11.908±0.00 6.620±4.31 3.482±0.00 2.339±0.00 17.136±0.00 9.994±0.00 20.340±0.00 23.580±11.47 19.158±7.30 7.905±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009A CIL_00009A_0001 CGP 22:50263713-50307627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 ISS neural tube closure
GO:0001932 ISS regulation of protein phosphorylation
GO:0004872 IEA receptor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005887 ISS integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007405 ISS neuroblast proliferation
GO:0007420 ISS brain development
GO:0008360 ISS regulation of cell shape
GO:0009986 IDA cell surface
GO:0016020 IEA membrane
GO:0017154 ISS semaphorin receptor activity
GO:0032319 ISS regulation of Rho GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0071526 ISS semaphorin-plexin signaling pathway
GO:2001222 ISS regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060808 Plxnb2-201 protein_coding Mus_musculus 0 5452
ENSMUST00000109331 Plxnb2-001 protein_coding Mus_musculus 0 5452
ENSDART00000048821 plxnb2a-201 protein_coding Danio_rerio 0 1059
ENSDART00000143773 plxnb2a-001 protein_coding Danio_rerio 0 1059
ENSMUST00000151418 Plxnb2-004 processed_transcript Mus_musculus 0 326
ENSMUST00000072093 Plxnb1-001 protein_coding Mus_musculus 8.00001e-41 174

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