C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449103 PLXNB2-001 ENSG00000196576 9606 - 22:50274979-50307627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449103 7.855±0.00 4.648±0.00 1.725±0.00 4.132±3.36 8.943±0.00 7.503±0.00 3.574±3.22 6.711±0.00 1.987±0.00 1.430±0.00 3.418±0.00 25.713±16.66 12.766±4.90 5.780±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009A CIL_00009A_0001 CGP 22:50263713-50307627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 ISS neural tube closure
GO:0001932 ISS regulation of protein phosphorylation
GO:0004872 IEA receptor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005887 ISS integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007405 ISS neuroblast proliferation
GO:0007420 ISS brain development
GO:0008360 ISS regulation of cell shape
GO:0009986 IDA cell surface
GO:0016020 IEA membrane
GO:0017154 ISS semaphorin receptor activity
GO:0032319 ISS regulation of Rho GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0050772 IEA positive regulation of axonogenesis
GO:0070062 IDA extracellular vesicular exosome
GO:0071526 ISS semaphorin-plexin signaling pathway
GO:2001222 ISS regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060808 Plxnb2-201 protein_coding Mus_musculus 0 5470
ENSMUST00000109331 Plxnb2-001 protein_coding Mus_musculus 0 5470
ENSDART00000048821 plxnb2a-201 protein_coding Danio_rerio 0 1059
ENSDART00000143773 plxnb2a-001 protein_coding Danio_rerio 0 1059
ENSMUST00000151418 Plxnb2-004 processed_transcript Mus_musculus 0 326
ENSMUST00000072093 Plxnb1-001 protein_coding Mus_musculus 8.99998e-41 174

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