C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072111 St6galnac6-201 ENSMUSG00000026811 10090 + 2:32608071-32620804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072111
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072111 6.130±0.12 3.408±0.16 4.940±3.13 10.767±0.00 16.595±2.59 1.708±0.42 6.549±5.67 5.824±0.21 11.334±3.59 6.388±2.20 0.857±0.53 2.439±1.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001574 IDA ganglioside biosynthetic process
GO:0001665 IDA alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008373 IDA sialyltransferase activity
GO:0009312 IDA oligosaccharide biosynthetic process
GO:0009988 IC cell-cell recognition
GO:0016021 IEA integral component of membrane
GO:0097503 IDA:IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291839 ST6GALNAC6-201 protein_coding Homo_sapiens 0 1489
ENST00000373141 ST6GALNAC6-010 protein_coding Homo_sapiens 0 1441
ENST00000373142 ST6GALNAC6-006 protein_coding Homo_sapiens 0 1463
ENST00000373144 ST6GALNAC6-008 protein_coding Homo_sapiens 0 1441
ENST00000373146 ST6GALNAC6-007 protein_coding Homo_sapiens 0 1489
ENST00000447681 ST6GALNAC6-011 protein_coding Homo_sapiens 0 843
ENST00000463086 ST6GALNAC6-014 processed_transcript Homo_sapiens 0 335
ENST00000478319 ST6GALNAC6-004 processed_transcript Homo_sapiens 0 327
ENST00000480417 ST6GALNAC6-012 processed_transcript Homo_sapiens 0 699
ENST00000481355 ST6GALNAC6-001 processed_transcript Homo_sapiens 0 375
ENST00000485320 ST6GALNAC6-009 processed_transcript Homo_sapiens 0 1373
ENST00000494541 ST6GALNAC6-013 processed_transcript Homo_sapiens 0 525
ENST00000494611 ST6GALNAC6-005 processed_transcript Homo_sapiens 0.00003 53
ENST00000542456 ST6GALNAC6-202 protein_coding Homo_sapiens 0 603
ENST00000622357 ST6GALNAC6-203 protein_coding Homo_sapiens 0 1441

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