| Transcript ID | Colon |
|---|---|
| ENST00000622357 | 3.523±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000622357  |
ST6GALNAC6-203 |
ENSG00000160408 |
9606 | - |
9:127885321-127905348  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002CF | CIL_0002CF_0002 | CGP | 9:127885321-127917038 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001574 | ISS | ganglioside biosynthetic process |
| GO:0001665 | ISS | alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity |
| GO:0005737 | ISS | cytoplasm |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0005886 | NAS | plasma membrane |
| GO:0006486 | IEA | protein glycosylation |
| GO:0006677 | IDA | glycosylceramide metabolic process |
| GO:0006687 | IDA | glycosphingolipid metabolic process |
| GO:0008373 | ISS:IEA | sialyltransferase activity |
| GO:0009100 | IDA | glycoprotein metabolic process |
| GO:0009312 | ISS | oligosaccharide biosynthetic process |
| GO:0009988 | IC | cell-cell recognition |
| GO:0016021 | IEA | integral component of membrane |
| GO:0097503 | IEA | sialylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000113290
|
St6galnac6-203 | protein_coding | Mus_musculus | 0 | 1447 |
|
ENSMUST00000095045
|
St6galnac6-202 | protein_coding | Mus_musculus | 0 | 1445 |
|
ENSMUST00000081879
|
St6galnac6-007 | protein_coding | Mus_musculus | 0 | 1443 |
|
ENSMUST00000072111
|
St6galnac6-201 | protein_coding | Mus_musculus | 0 | 1441 |
|
ENSMUST00000095044
|
St6galnac6-001 | protein_coding | Mus_musculus | 0 | 1441 |
|
ENSMUST00000183538
|
St6galnac6-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1325 |
|
ENSMUST00000131229
|
St6galnac6-004 | protein_coding | Mus_musculus | 0 | 1125 |
|
ENSMUST00000140983
|
St6galnac6-005 | protein_coding | Mus_musculus | 0 | 955 |
|
ENSMUST00000149220
|
St6galnac6-012 | processed_transcript | Mus_musculus | 0 | 845 |
|
ENSMUST00000128811
|
St6galnac6-010 | protein_coding | Mus_musculus | 0 | 497 |
|
ENSMUST00000126636
|
St6galnac6-011 | processed_transcript | Mus_musculus | 0 | 444 |
|
ENSMUST00000129165
|
St6galnac6-008 | protein_coding | Mus_musculus | 0 | 292 |
