C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485320 ST6GALNAC6-009 ENSG00000160408 9606 - 9:127885326-127899574 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungOvaryPlacentaENST00000485320
Transcript ID Brain Colon Liver Lung Ovary Placenta
ENST00000485320 3.354±0.00 11.579±9.50 15.667±0.00 42.011±0.00 0.801±0.00 7.418±2.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CF CIL_0002CF_0002 CGP 9:127885321-127917038

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183538 St6galnac6-002 nonsense_mediated_decay Mus_musculus 0 1607
ENSMUST00000095044 St6galnac6-001 protein_coding Mus_musculus 0 1526
ENSMUST00000072111 St6galnac6-201 protein_coding Mus_musculus 0 1373
ENSMUST00000113290 St6galnac6-203 protein_coding Mus_musculus 0 1325
ENSMUST00000081879 St6galnac6-007 protein_coding Mus_musculus 0 1325
ENSMUST00000095045 St6galnac6-202 protein_coding Mus_musculus 0 1325
ENSMUST00000131229 St6galnac6-004 protein_coding Mus_musculus 0 1007
ENSMUST00000149220 St6galnac6-012 processed_transcript Mus_musculus 0 833
ENSMUST00000140983 St6galnac6-005 protein_coding Mus_musculus 0 833
ENSMUST00000128811 St6galnac6-010 protein_coding Mus_musculus 0 492
ENSMUST00000126636 St6galnac6-011 processed_transcript Mus_musculus 0 444
ENSMUST00000129165 St6galnac6-008 protein_coding Mus_musculus 0 289

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