C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterol carrier protein 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000013079 scp2a-001 ENSDARG00000012194 7955 - 2:5647589-5682147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000013079
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000013079 6.403±1.43 11.287±2.17 85.231±20.39 39.406±0.00 14.376±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0032934 IEA sterol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030340 Scp2-001 protein_coding Mus_musculus 0 494
ENSMUST00000072166 Scp2-ps2-201 processed_pseudogene Mus_musculus 9.94922e-44 180
ENSMUST00000106701 Scp2-007 protein_coding Mus_musculus 0 243
ENSMUST00000135379 Scp2-003 processed_transcript Mus_musculus 0 259
ENST00000371509 SCP2-007 protein_coding Homo_sapiens 0 283
ENST00000371514 SCP2-001 protein_coding Homo_sapiens 0 409
ENST00000407246 SCP2-011 protein_coding Homo_sapiens 0 387
ENST00000430330 SCP2-008 protein_coding Homo_sapiens 7e-34 148
ENST00000435345 SCP2-015 protein_coding Homo_sapiens 7e-34 148
ENST00000478274 SCP2-006 protein_coding Homo_sapiens 8e-29 132
ENST00000478631 SCP2-009 nonsense_mediated_decay Homo_sapiens 4e-33 148
ENST00000528311 SCP2-010 protein_coding Homo_sapiens 0 409
ENST00000533119 SCP2-014 nonsense_mediated_decay Homo_sapiens 2e-28 130

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