C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2D 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072578 Ube2d2b-001 ENSMUSG00000063447 10090 + 5:107830099-107831776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000072578
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000072578 0.044±0.03 0.123±0.08 0.030±0.00 0.043±0.03 0.109±0.00 0.048±0.00 0.066±0.01 0.105±0.02 0.396±0.23 0.025±0.00 0.161±0.07 0.180±0.07 134.587±54.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C9 CIL_0007C9_0003 CGP 5:107716657-107875107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253815 UBE2D2-201 protein_coding Homo_sapiens 0 592
ENST00000321805 UBE2D3-013 protein_coding Homo_sapiens 0 412
ENST00000338145 UBE2D3-006 protein_coding Homo_sapiens 0 412
ENST00000343106 UBE2D3-002 protein_coding Homo_sapiens 0 364
ENST00000349311 UBE2D3-012 protein_coding Homo_sapiens 0 412
ENST00000350435 UBE2D3-014 protein_coding Homo_sapiens 0 409
ENST00000357194 UBE2D3-003 protein_coding Homo_sapiens 0 409
ENST00000394801 UBE2D3-004 protein_coding Homo_sapiens 0 412
ENST00000394803 UBE2D3-005 protein_coding Homo_sapiens 0 412
ENST00000394804 UBE2D3-201 protein_coding Homo_sapiens 0 412
ENST00000398733 UBE2D2-001 protein_coding Homo_sapiens 0 737
ENST00000398734 UBE2D2-004 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000453744 UBE2D3-001 protein_coding Homo_sapiens 0 412
ENST00000502404 UBE2D3-017 protein_coding Homo_sapiens 0 409
ENST00000502563 UBE2D3-027 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000502690 UBE2D3-011 protein_coding Homo_sapiens 0 215
ENST00000503742 UBE2D3-007 retained_intron Homo_sapiens 0 259
ENST00000504211 UBE2D3-019 protein_coding Homo_sapiens 0 409
ENST00000505007 UBE2D2-003 protein_coding Homo_sapiens 0 499
ENST00000505009 UBE2D3-031 retained_intron Homo_sapiens 0 333
ENST00000505207 UBE2D3-015 protein_coding Homo_sapiens 0 409
ENST00000505307 UBE2D3-022 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000505548 UBE2D2-002 protein_coding Homo_sapiens 0 686
ENST00000507845 UBE2D3-016 protein_coding Homo_sapiens 0 409
ENST00000508238 UBE2D3-009 protein_coding Homo_sapiens 0 267
ENST00000508474 UBE2D3-008 retained_intron Homo_sapiens 0 409
ENST00000508476 UBE2D3-018 protein_coding Homo_sapiens 0 272
ENST00000508635 UBE2D3-024 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000508974 UBE2D3-026 nonsense_mediated_decay Homo_sapiens 1e-35 154
ENST00000510129 UBE2D3-028 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000510470 UBE2D2-007 retained_intron Homo_sapiens 7e-39 163
ENST00000511691 UBE2D2-008 retained_intron Homo_sapiens 0 505
ENST00000511725 UBE2D2-006 protein_coding Homo_sapiens 0 651
ENST00000514755 UBE2D3-020 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187
ENST00000618836 UBE2D3-202 protein_coding Homo_sapiens 0 411

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