C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072915 Foxb2-201 ENSMUSG00000056829 10090 - 19:16872316-16873830 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000072915
Transcript ID Brain Testis
ENSMUST00000072915 0.191±0.11 0.313±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AK CIL_0009AK_0002 VISTA 19:16783804-17385681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231121 HAND1-001 protein_coding Homo_sapiens 0.00003 55
ENST00000320354 FOXC2-001 protein_coding Homo_sapiens 0 204
ENST00000335071 FOXE3-001 protein_coding Homo_sapiens 9e-35 152
ENST00000371116 FOXD3-001 protein_coding Homo_sapiens 0.0001 53
ENST00000376708 FOXB2-001 protein_coding Homo_sapiens 0 1358
ENST00000380874 FOXC1-001 protein_coding Homo_sapiens 8.96831e-44 183
ENST00000396057 FOXB1-001 protein_coding Homo_sapiens 0 420

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