C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 33B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073890 Krt33b-001 ENSMUSG00000057723 10090 - 11:100023634-100029868 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverMuscleOvaryPlacentaENSMUST00000073890
Transcript ID Bladder Brain Heart Liver Muscle Ovary Placenta
ENSMUST00000073890 0.010±0.00 0.014±0.00 0.017±0.00 0.006±0.00 0.490±0.46 0.060±0.00 0.118±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000Y CGP 11:100011195-100029868
CIL_00056U CIL_00056U_0019 CGP 11:100023634-100041554

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007735 KRT33A-001 protein_coding Homo_sapiens 0 1411
ENST00000225899 KRT32-001 protein_coding Homo_sapiens 0 861
ENST00000246639 KRT35-001 protein_coding Homo_sapiens 0 990
ENST00000246646 KRT38-001 protein_coding Homo_sapiens 0 453
ENST00000251645 KRT31-001 protein_coding Homo_sapiens 0 1352
ENST00000251646 KRT33B-001 protein_coding Homo_sapiens 0 1448
ENST00000393989 KRT35-201 protein_coding Homo_sapiens 0 990
ENST00000394001 KRT34-001 protein_coding Homo_sapiens 0 1279
ENST00000570596 KRT33B-001 protein_coding Homo_sapiens 0 1448
ENST00000571312 RP1-18F17.1-001 protein_coding Homo_sapiens 0 1284
ENST00000573281 KRT31-001 protein_coding Homo_sapiens 0 1352
ENST00000576236 KRT33A-001 protein_coding Homo_sapiens 0 1411
ENST00000576522 AC004231.7-001 protein_coding Homo_sapiens 0 1279
ENST00000620421 KRT33B-201 protein_coding Homo_sapiens 0 1417

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