C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desmocollin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075214 Dsc2-002 ENSMUSG00000024331 10090 - 18:20030633-20059478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075214
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075214 1.389±0.24 0.895±0.19 1.116±0.04 0.126±0.07 0.636±0.11 17.676±7.19 4.577±0.92 0.477±0.16 5.179±3.02 2.176±1.29 0.065±0.04 1.776±0.78 11.982±3.82 0.109±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EN CIL_0006EN_0002 CGP 18:19960930-20059554
CIL_0006EM CIL_0006EM_0002 CGP 18:20030633-20114773

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0009267 IEP cellular response to starvation
GO:0016021 IEA integral component of membrane
GO:0030057 IDA desmosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251081 DSC2-002 protein_coding Homo_sapiens 0 1709
ENST00000280904 DSC2-001 protein_coding Homo_sapiens 0 1851

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