C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2531
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075609 Gm2531-201 ENSMUSG00000058567 10090 - 18:10145453-10145965 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075609
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075609 0.118±0.01 0.180±0.14 0.368±0.20 0.357±0.09 0.209±0.00 0.185±0.08 0.135±0.06 0.399±0.23 0.124±0.00 0.372±0.20 0.159±0.05 0.153±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015E CIL_00015E_0002 CGP 18:9995432-10181792
CIL_0005O1 CIL_0005O1_0002 CGP 18:10064401-10562934

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296581 LSM6-001 protein_coding Homo_sapiens 0 320
ENST00000502781 LSM6-002 protein_coding Homo_sapiens 0 320
ENST00000504181 LSM6-005 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000507449 LSM6-006 retained_intron Homo_sapiens 0 250
ENST00000515311 LSM6-007 nonsense_mediated_decay Homo_sapiens 0 320

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