C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076687 Cdc42bpa-003 ENSMUSG00000026490 10090 + 1:179961110-180162166 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000076687
Transcript ID Ovary Placenta
ENSMUST00000076687 6.240±1.88 4.406±2.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000985 CIL_000985_0002 VISTA 1:179908053-180512549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007097 IMP nuclear migration
GO:0031532 IEA actin cytoskeleton reorganization
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334218 CDC42BPA-003 protein_coding Homo_sapiens 0 2819
ENST00000366764 CDC42BPA-201 protein_coding Homo_sapiens 0 2819
ENST00000366766 CDC42BPA-202 protein_coding Homo_sapiens 0 2819
ENST00000366767 CDC42BPA-002 protein_coding Homo_sapiens 0 6493
ENST00000366769 CDC42BPA-001 protein_coding Homo_sapiens 0 4198
ENST00000429440 CDC42BPA-007 protein_coding Homo_sapiens 0 2039
ENST00000441725 CDC42BPA-005 protein_coding Homo_sapiens 0 1967
ENST00000442054 CDC42BPA-004 protein_coding Homo_sapiens 0 2819
ENST00000448940 CDC42BPA-006 protein_coding Homo_sapiens 0 3066
ENST00000462553 CDC42BPA-009 processed_transcript Homo_sapiens 0 231
ENST00000478573 CDC42BPA-010 retained_intron Homo_sapiens 0 680
ENST00000488131 CDC42BPA-008 processed_transcript Homo_sapiens 0 791

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