C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase alpha (DMPK-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366766 CDC42BPA-202 ENSG00000143776 9606 - 1:226989866-227318125 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLungMuscleOvaryPlacentaTestisENST00000366766
Transcript ID Adipose Adrenal Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000366766 3.071±0.00 1.236±0.00 2.502±0.00 1.758±0.00 0.801±0.00 0.472±0.00 1.033±0.00 0.787±0.42 5.341±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CY CIL_0008CY_0001 VISTA 1:226526998-227129223
CIL_000985 CIL_000985_0001 VISTA 1:226618699-227222072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097453 Cdc42bpa-002 protein_coding Mus_musculus 0 4671
ENSMUST00000111117 Cdc42bpa-001 protein_coding Mus_musculus 0 4638
ENSMUST00000097450 Cdc42bpa-004 protein_coding Mus_musculus 0 4080
ENSMUST00000133890 Cdc42bpa-008 protein_coding Mus_musculus 0 4034
ENSMUST00000076687 Cdc42bpa-003 protein_coding Mus_musculus 0 2819
ENSMUST00000143176 Cdc42bpa-009 protein_coding Mus_musculus 0 2309
ENSMUST00000135056 Cdc42bpa-010 protein_coding Mus_musculus 0 2098
ENSMUST00000134959 Cdc42bpa-005 processed_transcript Mus_musculus 0 1877
ENSMUST00000152582 Cdc42bpa-011 retained_intron Mus_musculus 0 791
ENSMUST00000143350 Cdc42bpa-007 processed_transcript Mus_musculus 0 614
ENSMUST00000139002 Cdc42bpa-013 retained_intron Mus_musculus 0 549
ENSMUST00000145181 Cdc42bpa-014 protein_coding Mus_musculus 0 534
ENSMUST00000145274 Cdc42bpa-015 processed_transcript Mus_musculus 0 466
ENSMUST00000143161 Cdc42bpa-012 retained_intron Mus_musculus 0 375
ENSMUST00000129754 Cdc42bpa-016 retained_intron Mus_musculus 0 357
ENSMUST00000132894 Cdc42bpa-006 retained_intron Mus_musculus 0 231

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