C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase alpha (DMPK-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366767 CDC42BPA-002 ENSG00000143776 9606 - 1:226989865-227317182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000366767
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000366767 4.049±0.00 1.362±0.00 3.932±0.00 1.689±0.38 3.480±0.00 1.181±0.00 1.564±0.02 1.718±1.33 2.275±1.00 1.896±1.15 1.229±0.60 3.052±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CY CIL_0008CY_0001 VISTA 1:226526998-227129223
CIL_000985 CIL_000985_0001 VISTA 1:226618699-227222072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0004672 IEA protein kinase activity
GO:0004674 IDA:IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IDA:IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005911 ISS cell-cell junction
GO:0006468 IDA:IEA protein phosphorylation
GO:0016477 IMP cell migration
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0031032 IMP actomyosin structure organization
GO:0031252 ISS cell leading edge
GO:0031532 IDA actin cytoskeleton reorganization
GO:0035556 IEA intracellular signal transduction
GO:0042641 IDA actomyosin
GO:0042802 IPI identical protein binding
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076687 Cdc42bpa-003 protein_coding Mus_musculus 0 6493
ENSMUST00000097450 Cdc42bpa-004 protein_coding Mus_musculus 0 4198
ENSMUST00000143176 Cdc42bpa-009 protein_coding Mus_musculus 0 3066
ENSMUST00000133890 Cdc42bpa-008 protein_coding Mus_musculus 0 2822
ENSMUST00000111117 Cdc42bpa-001 protein_coding Mus_musculus 0 2822
ENSMUST00000097453 Cdc42bpa-002 protein_coding Mus_musculus 0 2724
ENSMUST00000134959 Cdc42bpa-005 processed_transcript Mus_musculus 0 2614
ENSMUST00000135056 Cdc42bpa-010 protein_coding Mus_musculus 0 1967
ENSMUST00000152582 Cdc42bpa-011 retained_intron Mus_musculus 0 791
ENSMUST00000143350 Cdc42bpa-007 processed_transcript Mus_musculus 0 614
ENSMUST00000145181 Cdc42bpa-014 protein_coding Mus_musculus 0 534
ENSMUST00000145274 Cdc42bpa-015 processed_transcript Mus_musculus 0 466
ENSMUST00000143161 Cdc42bpa-012 retained_intron Mus_musculus 0 375
ENSMUST00000129754 Cdc42bpa-016 retained_intron Mus_musculus 0 357
ENSMUST00000132894 Cdc42bpa-006 retained_intron Mus_musculus 0 231

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