C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase alpha (DMPK-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366769 CDC42BPA-001 ENSG00000143776 9606 - 1:226989865-227318474 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366769
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366769 2.054±0.00 3.374±0.00 1.823±0.00 3.041±0.35 0.756±0.00 0.754±0.28 2.864±2.28 1.050±0.00 0.400±0.00 1.624±0.56 0.649±0.00 2.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CY CIL_0008CY_0001 VISTA 1:226526998-227129223
CIL_000985 CIL_000985_0001 VISTA 1:226618699-227222072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000287 IDA magnesium ion binding
GO:0004672 IEA protein kinase activity
GO:0004674 IDA:IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IDA:IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005911 ISS cell-cell junction
GO:0006468 IDA:IEA protein phosphorylation
GO:0007097 IEA nuclear migration
GO:0016477 IMP cell migration
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0031032 IMP actomyosin structure organization
GO:0031252 ISS cell leading edge
GO:0031532 IDA actin cytoskeleton reorganization
GO:0035556 IEA intracellular signal transduction
GO:0042641 IDA actomyosin
GO:0042802 IPI identical protein binding
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097450 Cdc42bpa-004 protein_coding Mus_musculus 0 6892
ENSMUST00000097453 Cdc42bpa-002 protein_coding Mus_musculus 0 4671
ENSMUST00000111117 Cdc42bpa-001 protein_coding Mus_musculus 0 4638
ENSMUST00000076687 Cdc42bpa-003 protein_coding Mus_musculus 0 4198
ENSMUST00000143176 Cdc42bpa-009 protein_coding Mus_musculus 0 3066
ENSMUST00000133890 Cdc42bpa-008 protein_coding Mus_musculus 0 2822
ENSMUST00000135056 Cdc42bpa-010 protein_coding Mus_musculus 0 1967
ENSMUST00000134959 Cdc42bpa-005 processed_transcript Mus_musculus 0 1877
ENSMUST00000152582 Cdc42bpa-011 retained_intron Mus_musculus 0 791
ENSMUST00000143350 Cdc42bpa-007 processed_transcript Mus_musculus 0 614
ENSMUST00000139002 Cdc42bpa-013 retained_intron Mus_musculus 0 549
ENSMUST00000145181 Cdc42bpa-014 protein_coding Mus_musculus 0 534
ENSMUST00000145274 Cdc42bpa-015 processed_transcript Mus_musculus 0 466
ENSMUST00000143161 Cdc42bpa-012 retained_intron Mus_musculus 0 375
ENSMUST00000129754 Cdc42bpa-016 retained_intron Mus_musculus 0 357
ENSMUST00000132894 Cdc42bpa-006 retained_intron Mus_musculus 0 231

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