C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077737 Brd3-002 ENSMUSG00000026918 10090 - 2:27445579-27475686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000077737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000077737 9.571±3.89 23.449±3.79 13.429±0.86 18.258±8.96 7.054±1.61 11.599±1.17 4.711±0.71 7.776±0.27 7.396±0.95 11.125±1.95 3.894±0.60 19.204±3.78 18.493±6.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014Z CIL_00014Z_0002 CGP 2:27262104-27507662
CIL_000150 CIL_000150_0002 CGP 2:27445579-27536535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303407 BRD3-001 protein_coding Homo_sapiens 0 2767
ENST00000371834 BRD3-002 protein_coding Homo_sapiens 0 1975
ENST00000473349 BRD3-003 processed_transcript Homo_sapiens 0 737
ENST00000494743 BRD3-006 retained_intron Homo_sapiens 0 494

Loading