C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078547 Sec22c-201 ENSMUSG00000061536 10090 - 9:121680047-121705029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078547 1.815±0.79 3.003±0.44 1.592±0.28 4.224±2.15 1.475±0.48 2.712±0.33 1.090±0.26 1.915±0.17 1.538±0.64 3.110±0.26 1.256±0.42 4.070±2.15 1.076±0.71 1.107±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000480 CIL_000480_0002 CGP 9:121642716-121705490
CIL_00047Z CIL_00047Z_0002 CGP 9:121680047-121712921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264454 SEC22C-002 protein_coding Homo_sapiens 0 911
ENST00000451653 SEC22C-003 protein_coding Homo_sapiens 0 671

Loading