C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078694 Ppp1r1b-001 ENSMUSG00000061718 10090 + 11:98348404-98357796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078694 0.240±0.16 0.093±0.02 0.049±0.02 15.965±17.04 0.514±0.25 140.255±10.47 3.254±0.88 20.077±3.02 0.149±0.11 8.297±1.14 0.091±0.04 7.440±2.23 0.007±0.00 0.187±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00061T CIL_00061T_0002 CGP 11:98325415-98357796
CIL_0000TI CIL_0000TI_0003 CGP 11:98348404-98381112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001975 IGI response to amphetamine
GO:0004864 TAS protein phosphatase inhibitor activity
GO:0004865 TAS protein serine/threonine phosphatase inhibitor activity
GO:0005634 IDA nucleus
GO:0005737 TAS cytoplasm
GO:0006351 IMP transcription, DNA-templated
GO:0007621 IDA negative regulation of female receptivity
GO:0008542 IGI visual learning
GO:0031748 IEA D1 dopamine receptor binding
GO:0031749 IEA D2 dopamine receptor binding
GO:0031750 IEA D3 dopamine receptor binding
GO:0031751 IEA D4 dopamine receptor binding
GO:0031752 IEA D5 dopamine receptor binding
GO:0035556 IEA intracellular signal transduction
GO:0043025 IDA neuronal cell body
GO:0043086 IEA negative regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254079 PPP1R1B-001 protein_coding Homo_sapiens 0 865
ENST00000394265 PPP1R1B-005 protein_coding Homo_sapiens 0 728
ENST00000394267 PPP1R1B-002 protein_coding Homo_sapiens 0 728
ENST00000579000 PPP1R1B-008 protein_coding Homo_sapiens 0 230
ENST00000580772 PPP1R1B-011 retained_intron Homo_sapiens 0 198
ENST00000580825 PPP1R1B-013 protein_coding Homo_sapiens 0 658
ENST00000582680 PPP1R1B-014 protein_coding Homo_sapiens 0 377
ENST00000583446 PPP1R1B-012 retained_intron Homo_sapiens 0 324

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