C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254079 PPP1R1B-001 ENSG00000131771 9606 + 17:39626924-39636626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungOvaryTestisENST00000254079
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000254079 11.305±0.00 85.769±68.40 28.022±26.93 15.393±9.19 0.529±0.00 2.526±0.00 16.267±0.00 14.869±0.00 5.621±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_00061T CIL_00061T_0001 CGP 17:39603536-39636626
CIL_0000TI CIL_0000TI_0002 CGP 17:39626740-39663484

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001975 IEA response to amphetamine
GO:0004860 TAS protein kinase inhibitor activity
GO:0004864 TAS:IEA protein phosphatase inhibitor activity
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006469 TAS negative regulation of protein kinase activity
GO:0007165 TAS:IEA signal transduction
GO:0007621 IEA negative regulation of female receptivity
GO:0008542 IEA visual learning
GO:0008599 TAS protein phosphatase type 1 regulator activity
GO:0031748 IEA D1 dopamine receptor binding
GO:0031749 IEA D2 dopamine receptor binding
GO:0031750 IEA D3 dopamine receptor binding
GO:0031751 IEA D4 dopamine receptor binding
GO:0031752 IEA D5 dopamine receptor binding
GO:0035556 IEA intracellular signal transduction
GO:0043025 IEA neuronal cell body
GO:0043086 TAS negative regulation of catalytic activity
GO:0050790 TAS regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078694 Ppp1r1b-001 protein_coding Mus_musculus 0 865
ENSMUST00000137634 Ppp1r1b-006 protein_coding Mus_musculus 0 728
ENSMUST00000150762 Ppp1r1b-002 protein_coding Mus_musculus 0 728
ENSMUST00000132443 Ppp1r1b-005 retained_intron Mus_musculus 0 630
ENSMUST00000147415 Ppp1r1b-003 retained_intron Mus_musculus 0 440

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