C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 1, regulatory (inhibitor) subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580772 PPP1R1B-011 ENSG00000131771 9606 + 17:39628526-39630452 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000580772
Transcript ID Lung
ENST00000580772 1.381±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_00061T CIL_00061T_0001 CGP 17:39603536-39636626
CIL_0000TI CIL_0000TI_0002 CGP 17:39626740-39663484

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150762 Ppp1r1b-002 protein_coding Mus_musculus 0 202
ENSMUST00000137634 Ppp1r1b-006 protein_coding Mus_musculus 0 200
ENSMUST00000078694 Ppp1r1b-001 protein_coding Mus_musculus 0 198
ENSMUST00000132443 Ppp1r1b-005 retained_intron Mus_musculus 8e-23 111
ENSMUST00000147415 Ppp1r1b-003 retained_intron Mus_musculus 4e-16 90

Loading