C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079028 Pop1-002 ENSMUSG00000022325 10090 + 15:34495323-34530637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079028 0.940±0.28 0.393±0.08 1.148±0.05 2.502±1.56 0.546±0.22 0.644±0.23 0.446±0.07 0.807±0.36 3.261±2.42 0.538±0.11 0.867±0.12 1.826±1.03 3.348±1.99 0.676±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000684 CIL_000684_0002 CGP 15:34484021-34530648
CIL_0003C8 CIL_0003C8_0002 CGP 15:34495304-34678706

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001682 IEA tRNA 5'-leader removal
GO:0004526 IEA ribonuclease P activity
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349693 POP1-002 protein_coding Homo_sapiens 0 2331
ENST00000401707 POP1-001 protein_coding Homo_sapiens 0 2346
ENST00000522319 POP1-004 protein_coding Homo_sapiens 0 606

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