C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone cluster 1, H3g
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080859 Hist1h3g-001 ENSMUSG00000099517 10090 + 13:23535434-23535860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080859 0.687±0.67 0.964±0.38 0.179±0.14 9.728±0.85 1.083±0.22 5.096±1.87 0.164±0.07 0.105±0.00 16.662±12.11 0.326±0.23 0.298±0.00 7.971±3.48 4.545±3.08 0.269±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 455
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 455
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 444
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 438
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 433
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 433
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 433
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 427
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 422
ENSDART00000136456 protein_coding Danio_rerio 0 416
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 414
ENSDART00000089844 protein_coding Danio_rerio 0 405
ENSDART00000151600 protein_coding Danio_rerio 0 355
ENSDART00000093030 protein_coding Danio_rerio 0 344
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 494
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 492
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 497
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 453
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 449

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