C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3h
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369163 HIST1H3H-001 ENSG00000278828 9606 + 6:27810064-27811300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369163
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369163 0.174±0.00 0.799±0.00 0.057±0.00 2.380±2.18 3.232±2.68 0.203±0.00 0.093±0.00 0.421±0.07 2.804±0.32 0.095±0.00 3.875±5.84 0.605±0.03 0.736±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0043234 IDA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0060968 IDA regulation of gene silencing
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091703 Hist1h3b-001 protein_coding Mus_musculus 0 501
ENSMUST00000105107 Hist1h3e-001 protein_coding Mus_musculus 0 501
ENSMUST00000080859 Hist1h3g-001 protein_coding Mus_musculus 0 497
ENSMUST00000188775 Hist1h3h-001 protein_coding Mus_musculus 0 496
ENSMUST00000189457 Hist1h3i-001 protein_coding Mus_musculus 0 492
ENSMUST00000091752 Hist1h3c-001 protein_coding Mus_musculus 0 492
ENSMUST00000075558 Hist1h3f-001 protein_coding Mus_musculus 0 490
ENSMUST00000176059 Hist2h3c1-001 protein_coding Mus_musculus 0 483
ENSMUST00000167403 Hist2h3c2-001 protein_coding Mus_musculus 0 483
ENSMUST00000091701 Hist1h3a-001 protein_coding Mus_musculus 0 475
ENSMUST00000098843 Hist2h3b-001 protein_coding Mus_musculus 0 468
ENSMUST00000122447 Gm12260-001 unprocessed_pseudogene Mus_musculus 0 429
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 390
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 374
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 374
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 368
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 366
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 359
ENSDART00000136456 protein_coding Danio_rerio 0 357
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 357
ENSDART00000089844 protein_coding Danio_rerio 0 350
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 346
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 346
ENSMUST00000108817 Hist3h2a-001 protein_coding Mus_musculus 0.000006 57
ENSMUST00000047697 Trim17-002 protein_coding Mus_musculus 0.000006 57
ENSMUST00000062045 Hist1h1e-001 protein_coding Mus_musculus 0.000006 57
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0.00008 53
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0.00008 53
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0.00008 53

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