C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H3c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000089844 ENSDARG00000068941 7955 + 25:36123127-36124432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000089844
Transcript ID Brain
ENSDART00000089844 0.109±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0030246 IEA carbohydrate binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059808 H2bfm-001 protein_coding Mus_musculus 0.00002 55
ENSMUST00000075558 Hist1h3f-001 protein_coding Mus_musculus 0 438
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0.00004 53
ENSMUST00000080859 Hist1h3g-001 protein_coding Mus_musculus 0 405
ENSMUST00000091701 Hist1h3a-001 protein_coding Mus_musculus 0 416
ENSMUST00000091703 Hist1h3b-001 protein_coding Mus_musculus 0 436
ENSMUST00000091752 Hist1h3c-001 protein_coding Mus_musculus 0 453
ENSMUST00000098843 Hist2h3b-001 protein_coding Mus_musculus 0 422
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0.00003 53
ENSMUST00000105107 Hist1h3e-001 protein_coding Mus_musculus 0 435
ENSMUST00000167403 Hist2h3c2-001 protein_coding Mus_musculus 0 422
ENSMUST00000176059 Hist2h3c1-001 protein_coding Mus_musculus 0 422
ENSMUST00000188775 Hist1h3h-001 protein_coding Mus_musculus 0 422
ENSMUST00000189457 Hist1h3i-001 protein_coding Mus_musculus 0 414
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 350
ENST00000436555 HIST3H2BA-001 unitary_pseudogene Homo_sapiens 0.000009 55
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 361

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