C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: purinergic receptor P2X, ligand-gated ion channel 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081554 P2rx4-002 ENSMUSG00000029470 10090 + 5:122707584-122729044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081554 29.355±2.33 18.033±4.20 13.713±0.84 3.257±1.46 32.942±7.38 93.035±17.71 9.127±2.99 30.169±2.26 13.530±6.41 41.539±0.98 1.303±0.38 16.201±4.22 12.953±5.84 2.616±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZL CIL_0002ZL_0002 CGP 5:122643911-122729738
CIL_0002ZK CIL_0002ZK_0002 CGP 5:122707584-122779410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001614 IBA purinergic nucleotide receptor activity
GO:0004931 IMP extracellular ATP-gated cation channel activity
GO:0005524 IEA ATP binding
GO:0005639 IBA integral component of nuclear inner membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006809 IDA nitric oxide biosynthetic process
GO:0006816 IMP calcium ion transport
GO:0035590 IEA purinergic nucleotide receptor signaling pathway
GO:0042311 IMP vasodilation
GO:0045177 IDA apical part of cell
GO:0060079 IMP regulation of excitatory postsynaptic membrane potential
GO:0098655 IMP cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337233 P2RX4-001 protein_coding Homo_sapiens 0 627
ENST00000359949 P2RX4-002 protein_coding Homo_sapiens 0 627
ENST00000499638 P2RX4-004 retained_intron Homo_sapiens 0 603
ENST00000538417 P2RX4-014 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000538701 P2RX4-011 protein_coding Homo_sapiens 0 239
ENST00000540930 P2RX4-010 processed_transcript Homo_sapiens 0 475
ENST00000541187 P2RX4-012 retained_intron Homo_sapiens 0 287
ENST00000542067 P2RX4-005 protein_coding Homo_sapiens 0 614
ENST00000543171 P2RX4-201 protein_coding Homo_sapiens 0 523
ENST00000543318 P2RX4-006 nonsense_mediated_decay Homo_sapiens 0 627
ENST00000543430 P2RX4-008 retained_intron Homo_sapiens 0 477
ENST00000543984 P2RX4-009 nonsense_mediated_decay Homo_sapiens 0 627

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