C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ZK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135124-ENSG00000110931 CGP 9606 12:121209857-121298308
GeneTranscriptPositionBiotype
ENSG00000135124 (P2RX4)
purinergic receptor P2X, ligand-gated ion channel, 4 		ENST00000314442 (P2RX4-013) 121212866-121223043 retained_intron
ENST00000337233 (P2RX4-001) 121209857-121234106 protein_coding
ENST00000359949 (P2RX4-002) 121210065-121234070 protein_coding
ENST00000397924 (P2RX4-007) 121222332-121228811 retained_intron
ENST00000499638 (P2RX4-004) 121210129-121234104 retained_intron
ENST00000538417 (P2RX4-014) 121210235-121232508 nonsense_mediated_decay
ENST00000538701 (P2RX4-011) 121210151-121229042 protein_coding
ENST00000540930 (P2RX4-010) 121210129-121228614 processed_transcript
ENST00000541187 (P2RX4-012) 121210171-121232507 retained_intron
ENST00000542067 (P2RX4-005) 121210165-121233547 protein_coding
ENST00000543171 (P2RX4-201) 121209861-121234104 protein_coding
ENST00000543318 (P2RX4-006) 121210129-121233737 nonsense_mediated_decay
ENST00000543430 (P2RX4-008) 121210117-121233547 retained_intron
ENST00000543984 (P2RX4-009) 121210129-121234106 nonsense_mediated_decay
CIL_0002ZK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029470-ENSMUSG00000029471 CGP 10090 5:122707584-122779410
GeneTranscriptPositionBiotype
ENSMUSG00000029470 (P2rx4)
purinergic receptor P2X, ligand-gated ion channel 4 		ENSMUST00000031429 (P2rx4-001) 122707584-122729738 protein_coding
ENSMUST00000081554 (P2rx4-002) 122707584-122729044 protein_coding
ENSMUST00000132062 (P2rx4-006) 122724655-122725265 retained_intron
ENSMUST00000139631 (P2rx4-003) 122707654-122727840 protein_coding
ENSMUST00000139712 (P2rx4-007) 122727664-122728585 processed_transcript
ENSMUST00000142664 (P2rx4-004) 122707654-122727840 protein_coding
ENSMUST00000152337 (P2rx4-005) 122707612-122719477 retained_intron
ENSMUSG00000029471 (Camkk2)
calcium/calmodulin-dependent protein kinase kinase 2, beta 		ENSMUST00000111668 (Camkk2-201) 122731173-122779410 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZK_0001ENSG00000135124ENST00000314442ENST00000337233ENST00000359949ENST00000397924ENST00000499638ENST00000538417ENST00000538701ENST00000540930ENST00000541187ENST00000542067ENST00000543171ENST00000543318ENST00000543430ENST00000543984CIL_0002ZK_0002ENSMUSG00000029470ENSMUST00000031429ENSMUST00000081554ENSMUST00000132062ENSMUST00000139631ENSMUST00000139712ENSMUST00000142664ENSMUST00000152337ENSMUSG00000029471ENSMUST00000111668
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZK_0001ENSG00000135124ENST00000314442ENST00000337233ENST00000359949ENST00000499638ENST00000540930ENST00000542067ENST00000543171ENST00000543318ENST00000543430ENST00000543984CIL_0002ZK_0002ENSMUSG00000029470ENSMUST00000031429ENSMUST00000081554ENSMUST00000142664ENSMUSG00000029471ENSMUST00000111668
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135124 ENST00000314442 0.330±0.00 N/A 0.192±0.00 0.224±0.00 0.884±0.00 0.373±0.00 N/A 0.161±0.00 N/A N/A N/A 0.766±0.00 N/A N/A
ENST00000337233 1.902±0.00 5.453±0.00 1.873±0.00 1.549±0.00 3.696±0.00 3.331±0.94 N/A 5.915±0.00 4.421±0.00 7.124±4.56 N/A 9.905±6.05 45.690±2.01 7.137±0.00
ENST00000359949 N/A N/A N/A N/A N/A N/A 1.361±0.00 1.192±0.00 0.345±0.00 N/A N/A 0.891±0.00 N/A N/A
ENST00000397924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000499638 N/A 1.246±0.00 N/A 0.527±0.00 N/A N/A N/A N/A N/A 0.546±0.00 N/A N/A N/A N/A
ENST00000538417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.724±0.00 N/A
ENST00000541187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542067 N/A N/A N/A N/A N/A N/A 0.319±0.00 0.748±0.00 N/A N/A N/A N/A N/A N/A
ENST00000543171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.199±0.00 10.470±0.00 N/A
ENST00000543318 3.381±0.00 N/A N/A N/A 1.661±0.00 2.160±0.00 N/A N/A 2.435±0.00 N/A 0.577±0.00 N/A N/A N/A
ENST00000543430 N/A N/A N/A 1.101±0.00 N/A N/A 0.159±0.00 N/A N/A N/A 0.144±0.00 N/A N/A N/A
ENST00000543984 3.298±0.00 4.377±0.00 0.754±0.00 1.811±0.13 3.289±0.37 N/A 0.958±0.78 3.465±2.01 3.105±1.27 0.791±0.00 1.401±0.00 9.513±8.87 23.488±12.51 3.071±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029470 ENSMUST00000031429 N/A N/A N/A 0.631±0.15 N/A N/A 1.417±0.00 N/A 1.424±0.35 N/A 0.374±0.03 4.747±1.56 1.370±0.61 0.659±0.25
ENSMUST00000081554 29.355±2.33 18.033±4.20 13.713±0.84 3.257±1.46 32.942±7.38 93.035±17.71 9.127±2.99 30.169±2.26 13.530±6.41 41.539±0.98 1.303±0.38 16.201±4.22 12.953±5.84 2.616±0.65
ENSMUST00000132062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142664 15.202±0.75 N/A 7.756±1.03 2.511±1.69 10.886±0.40 28.530±0.00 2.992±0.16 10.910±1.01 7.503±0.52 16.371±0.37 0.674±0.09 6.557±1.46 8.129±4.52 1.208±0.16
ENSMUST00000152337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029471 ENSMUST00000111668 11.663±2.29 14.782±1.30 6.894±1.92 12.958±3.68 11.772±2.77 2.689±1.47 2.553±0.51 5.318±1.56 4.397±1.17 10.752±2.62 0.746±0.27 21.780±7.27 2.859±2.19 6.538±1.62

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