C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: purinergic receptor P2X, ligand-gated ion channel, 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543984 P2RX4-009 ENSG00000135124 9606 + 12:121210129-121234106 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543984
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543984 3.298±0.00 4.377±0.00 0.754±0.00 1.811±0.13 3.289±0.37 0.958±0.78 3.465±2.01 3.105±1.27 0.791±0.00 1.401±0.00 9.513±8.87 23.488±12.51 3.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZL CIL_0002ZL_0001 CGP 12:121132819-121234106
CIL_0002ZK CIL_0002ZK_0001 CGP 12:121209857-121298308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001614 IEA purinergic nucleotide receptor activity
GO:0005216 IEA ion channel activity
GO:0005524 IEA ATP binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0034220 IEA ion transmembrane transport
GO:0035590 IEA purinergic nucleotide receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031429 P2rx4-001 protein_coding Mus_musculus 0 874
ENSMUST00000142664 P2rx4-004 protein_coding Mus_musculus 0 676
ENSMUST00000081554 P2rx4-002 protein_coding Mus_musculus 0 627
ENSMUST00000139631 P2rx4-003 protein_coding Mus_musculus 0 427
ENSMUST00000152337 P2rx4-005 retained_intron Mus_musculus 0 344
ENSMUST00000132062 P2rx4-006 retained_intron Mus_musculus 0 191

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