C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176170-ENSG00000175931 CGP 9606 17:76376584-76453206
GeneTranscriptPositionBiotype
ENSG00000161542 (PRPSAP1)
phosphoribosyl pyrophosphate synthetase-associated protein 1 		ENST00000324684 (PRPSAP1-002) 76310934-76354198 protein_coding
ENST00000423915 (PRPSAP1-004) 76330552-76384521 protein_coding
ENST00000435555 (PRPSAP1-003) 76312870-76354929 protein_coding
ENST00000436498 (PRPSAP1-007) 76328717-76353452 protein_coding
ENST00000442767 (PRPSAP1-005) 76332287-76384484 protein_coding
ENST00000446526 (PRPSAP1-001) 76309486-76354149 protein_coding
ENST00000472686 (PRPSAP1-008) 76313601-76328986 retained_intron
ENST00000488339 (PRPSAP1-009) 76312793-76328864 retained_intron
ENST00000494662 (PRPSAP1-006) 76330483-76353628 retained_intron
ENST00000586137 (PRPSAP1-011) 76313824-76330301 retained_intron
ENST00000588364 (PRPSAP1-012) 76311386-76313740 processed_transcript
ENST00000592474 (PRPSAP1-010) 76312793-76314690 retained_intron
ENSG00000175931 (UBE2O)
ubiquitin-conjugating enzyme E2O 		ENST00000319380 (UBE2O-001) 76389451-76453206 protein_coding
ENST00000586409 (UBE2O-002) 76395358-76453141 retained_intron
ENST00000586505 (UBE2O-004) 76401731-76405232 retained_intron
ENST00000587127 (UBE2O-003) 76389797-76399617 protein_coding
ENST00000587581 (UBE2O-006) 76397808-76399374 processed_transcript
ENST00000590658 (UBE2O-005) 76399789-76402641 protein_coding
ENSG00000176170 (SPHK1)
sphingosine kinase 1 		ENST00000323374 (SPHK1-001) 76384650-76387855 protein_coding
ENST00000392496 (SPHK1-004) 76385292-76387857 protein_coding
ENST00000545180 (SPHK1-006) 76376661-76387860 protein_coding
ENST00000587167 (SPHK1-011) 76386023-76386561 retained_intron
ENST00000588682 (SPHK1-009) 76381771-76386887 protein_coding
ENST00000590379 (SPHK1-010) 76383919-76386469 protein_coding
ENST00000590959 (SPHK1-003) 76384621-76387860 protein_coding
ENST00000591651 (SPHK1-008) 76376584-76385991 protein_coding
ENST00000591762 (SPHK1-005) 76382977-76387856 retained_intron
ENST00000592299 (SPHK1-002) 76384609-76387860 protein_coding
ENSG00000242931 (RPL7P49)
ribosomal protein L7 pseudogene 49 		ENST00000471402 (RPL7P49-001) 76430417-76431124 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00079O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061878-ENSMUSG00000020802 CGP 10090 11:116530925-116581447
GeneTranscriptPositionBiotype
ENSMUSG00000020802 (Ube2o)
ubiquitin-conjugating enzyme E2O 		ENSMUST00000082152 (Ube2o-001) 116537740-116581447 protein_coding
ENSMUST00000134102 (Ube2o-002) 116537740-116544017 processed_transcript
ENSMUST00000147851 (Ube2o-003) 116545751-116548841 processed_transcript
ENSMUSG00000061878 (Sphk1)
sphingosine kinase 1 		ENSMUST00000063396 (Sphk1-006) 116532925-116536657 protein_coding
ENSMUST00000063446 (Sphk1-005) 116532473-116536674 protein_coding
ENSMUST00000100201 (Sphk1-001) 116531911-116536670 protein_coding
ENSMUST00000106386 (Sphk1-004) 116532444-116536674 protein_coding
ENSMUST00000106387 (Sphk1-002) 116531744-116536657 protein_coding
ENSMUST00000106388 (Sphk1-003) 116530925-116536657 protein_coding
ENSMUST00000124682 (Sphk1-014) 116533575-116535698 protein_coding
ENSMUST00000134834 (Sphk1-016) 116532451-116536668 retained_intron
ENSMUST00000136526 (Sphk1-009) 116531162-116535284 retained_intron
ENSMUST00000138840 (Sphk1-008) 116531121-116535700 protein_coding
ENSMUST00000141798 (Sphk1-007) 116534740-116536670 protein_coding
ENSMUST00000145737 (Sphk1-010) 116532454-116535712 protein_coding
ENSMUST00000148185 (Sphk1-015) 116534160-116535288 retained_intron
ENSMUST00000150658 (Sphk1-013) 116533251-116535636 processed_transcript
ENSMUST00000154034 (Sphk1-012) 116533268-116535995 protein_coding
ENSMUST00000155102 (Sphk1-011) 116532457-116535341 protein_coding
ENSMUSG00000083314 (Gm11742)
predicted gene 11742 		ENSMUST00000119903 (Gm11742-001) 116550418-116550650 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079O_0001ENSG00000161542ENST00000324684ENST00000423915ENST00000435555ENST00000436498ENST00000442767ENST00000446526ENST00000472686ENST00000488339ENST00000494662ENST00000586137ENST00000588364ENST00000592474ENSG00000175931ENST00000319380ENST00000586409ENST00000586505ENST00000587127ENST00000587581ENST00000590658ENSG00000176170ENST00000323374ENST00000392496ENST00000545180ENST00000587167ENST00000588682ENST00000590379ENST00000590959ENST00000591651ENST00000591762ENST00000592299ENSG00000242931ENST00000471402CIL_00079O_0002ENSMUSG00000020802ENSMUST00000082152ENSMUST00000134102ENSMUST00000147851ENSMUSG00000061878ENSMUST00000063396ENSMUST00000063446ENSMUST00000100201ENSMUST00000106386ENSMUST00000106387ENSMUST00000106388ENSMUST00000124682ENSMUST00000134834ENSMUST00000136526ENSMUST00000138840ENSMUST00000141798ENSMUST00000145737ENSMUST00000148185ENSMUST00000150658ENSMUST00000154034ENSMUST00000155102ENSMUSG00000083314ENSMUST00000119903
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079O_0001ENSG00000161542ENST00000324684ENST00000435555ENST00000446526ENST00000472686ENST00000488339ENST00000494662ENST00000588364ENST00000592474ENSG00000175931ENST00000319380ENST00000586409ENST00000587127ENST00000590658ENSG00000176170ENST00000323374ENST00000392496ENST00000592299ENSG00000242931ENST00000471402CIL_00079O_0002ENSMUSG00000020802ENSMUST00000082152ENSMUST00000134102ENSMUSG00000061878ENSMUST00000063396ENSMUST00000063446ENSMUST00000100201ENSMUST00000106386ENSMUST00000106387ENSMUST00000106388ENSMUST00000124682ENSMUST00000134834ENSMUST00000138840ENSMUST00000141798ENSMUST00000145737ENSMUST00000148185ENSMUST00000150658ENSMUST00000154034ENSMUST00000155102ENSMUSG00000083314ENSMUST00000119903
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161542 ENST00000324684 13.296±0.00 14.075±0.00 1.178±0.00 13.815±10.78 11.282±9.85 4.913±3.44 2.055±1.30 6.112±0.80 2.558±1.76 8.095±2.94 2.226±1.81 14.008±8.89 19.504±7.19 23.743±12.29
ENST00000423915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435555 N/A N/A N/A N/A 2.748±0.00 N/A 0.469±0.00 3.091±0.00 1.456±0.00 N/A N/A 3.565±0.00 N/A N/A
ENST00000436498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446526 1.779±0.00 N/A N/A N/A N/A 0.952±0.00 0.748±0.00 1.144±0.33 0.783±0.07 N/A 0.703±0.00 N/A N/A N/A
ENST00000472686 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.812±0.00 N/A N/A N/A N/A
ENST00000488339 N/A N/A N/A 12.176±0.00 N/A N/A N/A N/A N/A N/A 1.628±0.00 42.454±0.00 45.547±0.00 50.812±0.00
ENST00000494662 N/A N/A N/A N/A N/A 3.530±0.00 N/A N/A N/A N/A 0.702±0.00 N/A N/A 15.513±0.00
ENST00000586137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588364 N/A N/A N/A N/A 2.193±0.00 N/A N/A N/A N/A N/A N/A 9.438±0.00 N/A N/A
ENST00000592474 N/A N/A N/A N/A N/A 0.914±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175931 ENST00000319380 3.731±0.00 2.781±0.00 0.146±0.00 6.064±4.01 1.210±0.78 3.134±0.00 3.563±0.00 3.116±0.00 0.614±0.00 1.450±0.00 3.565±2.97 3.859±2.97 1.869±0.92 9.466±1.18
ENST00000586409 N/A N/A N/A 0.914±0.00 0.318±0.00 0.965±0.00 0.560±0.00 N/A N/A N/A N/A 0.892±0.00 N/A N/A
ENST00000586505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587127 1.124±0.00 N/A 0.428±0.00 N/A 2.241±0.00 1.449±0.00 1.252±0.00 N/A 0.711±0.35 1.040±0.62 0.426±0.00 2.732±1.57 1.534±0.52 5.619±0.00
ENST00000587581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.938±0.00 N/A N/A N/A
ENSG00000176170 ENST00000323374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.643±0.00 N/A N/A N/A N/A
ENST00000392496 N/A 18.946±0.00 N/A N/A N/A N/A N/A N/A N/A 16.926±0.00 N/A N/A N/A N/A
ENST00000545180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592299 N/A N/A N/A N/A N/A 4.707±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242931 ENST00000471402 N/A 0.141±0.00 0.224±0.00 0.106±0.00 0.373±0.36 0.103±0.01 0.047±0.00 0.035±0.00 0.300±0.24 N/A N/A 0.489±0.64 0.028±0.00 0.281±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020802 ENSMUST00000082152 5.935±1.28 2.863±0.65 4.027±0.25 19.911±6.66 3.667±1.08 3.060±0.53 5.183±0.78 2.661±0.62 6.032±6.24 5.563±0.63 4.537±1.27 11.435±2.49 23.688±13.43 9.835±2.34
ENSMUST00000134102 2.686±0.24 5.240±1.66 2.724±1.10 7.984±3.79 2.618±1.64 2.081±0.86 3.204±0.26 1.499±0.58 5.089±4.08 2.109±0.71 N/A 6.025±2.37 11.305±4.61 3.276±0.77
ENSMUST00000147851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061878 ENSMUST00000063396 N/A 0.178±0.02 N/A 0.183±0.00 N/A 0.455±0.02 N/A 0.508±0.00 0.012±0.00 N/A 0.136±0.05 1.525±0.27 0.665±0.00 N/A
ENSMUST00000063446 1.598±0.37 0.241±0.00 1.669±0.24 0.191±0.00 0.670±0.23 0.560±0.09 N/A 1.010±0.43 1.636±1.03 4.177±1.48 0.052±0.00 1.703±0.39 0.444±0.00 0.307±0.11
ENSMUST00000100201 N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A 0.309±0.00 N/A 0.931±0.00 N/A
ENSMUST00000106386 N/A N/A N/A 0.213±0.00 N/A 0.816±0.00 N/A 0.779±0.06 3.911±1.96 2.338±0.00 0.363±0.13 3.003±0.00 0.578±0.27 0.490±0.00
ENSMUST00000106387 N/A N/A N/A N/A 0.621±0.00 N/A N/A N/A N/A N/A 0.276±0.00 0.586±0.00 0.456±0.00 N/A
ENSMUST00000106388 N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A 1.017±0.36 1.548±0.00 N/A
ENSMUST00000124682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A
ENSMUST00000134834 1.067±0.54 0.134±0.05 1.644±0.66 0.149±0.03 0.267±0.10 0.385±0.09 0.163±0.00 0.425±0.09 1.091±0.96 2.165±0.58 0.042±0.01 1.103±0.34 0.313±0.12 0.225±0.08
ENSMUST00000136526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138840 N/A N/A N/A N/A N/A N/A 0.335±0.00 N/A 0.104±0.02 N/A N/A N/A N/A N/A
ENSMUST00000141798 3.121±1.04 0.762±0.19 4.320±0.32 0.437±0.08 1.519±0.66 1.919±0.60 0.689±0.15 2.478±0.61 5.772±5.27 8.631±1.26 0.093±0.00 5.746±2.47 1.024±0.74 0.549±0.30
ENSMUST00000145737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A
ENSMUST00000148185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.04 N/A N/A N/A
ENSMUST00000150658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 3.721±0.00 N/A N/A
ENSMUST00000154034 N/A N/A N/A N/A N/A 1.584±0.00 N/A N/A 0.091±0.00 N/A 0.189±0.08 3.355±0.56 N/A N/A
ENSMUST00000155102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.272±0.14 1.360±0.00
ENSMUSG00000083314 ENSMUST00000119903 N/A N/A 0.502±0.17 0.336±0.18 N/A N/A N/A N/A 0.494±0.05 N/A N/A 1.197±0.46 0.820±0.00 N/A

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