C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Snf2-related CREBBP activator protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084563 Srcap-202 ENSMUSG00000053877 10090 + 7:127559386-127565266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungPlacentaENSMUST00000084563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Placenta
ENSMUST00000084563 9.738±1.06 16.759±2.29 9.937±1.39 7.532±0.18 15.570±0.00 13.807±1.34 8.965±1.40 5.114±1.06 10.548±0.55 4.171±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VJ CIL_0003VJ_0003 CGP 7:127485221-127567054
CIL_0001KJ CIL_0001KJ_0002 CGP 7:127511983-127583305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262518 SRCAP-001 protein_coding Homo_sapiens 0 1609
ENST00000380361 SRCAP-002 nonsense_mediated_decay Homo_sapiens 0 1609
ENST00000395059 SRCAP-201 protein_coding Homo_sapiens 0 1288

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